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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgtcttctggttttctattcatgcccaatttatacttgcttgtggtatttgctcaaactgaatatcctaagatggttgccattcttactacgtatctgcacgtttctccacaatcatgaatttattcacacttcatgcttttcatggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCCTACAGACTGAACGAGTCCACAGGTTATATCGACTATGATCAG

Basic information

species Physcomitrella patens
transcript PP1S21_270V6.1
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S21_270V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: LOC_Os03g52840.2 (Oryza sativa), 3'ss of exon 6
gtacgtcttctggttttctattcatgcccaatttatacttgcttgtggtatttgctcaaactgaatatcctaagatggttgccattcttactacgtatctgcacgtttctccacaatcatgaatttattcacacttcatgcttttcatggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCCTACAGACTGAACGAGTCCACAGGTTATATCGACTATGATCAG
                                               |  |||  ||   || ||| || ||     |||  ||    || | | | |  | ||  |  ||| |   ||||  ||  ||     ||||   | || ||||    ||||||||||| |||||||||||||| ||||| || ||||| ||||| |||||||||||| || | ||   ||| || |  || || |||||||||
----------------------------------------------tgagtttcttccccctcaat-tcttagttatgtt--cagatataatgc-tcttggtactctcatcctc--ccatggcttagttg----ttcaacttcttgatggttg-cagACTGATACTAAGAAGATTTCAGCAGTTTCGATATTCTTTGAGACAATGCCCTACAGATTGGATGAAAGCACTGGCTTGATTGATTATGATCAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162223942|gb|FC398948.1|FC398948
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162170713|gb|FC346300.1|FC346300
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162196160|gb|FC374320.1|FC374320
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|67574738|gb|BJ947562.1|BJ947562
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAA
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAA
EST: gi|162163180|gb|FC340234.1|FC340234
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|67573841|gb|BJ946665.1|BJ946665
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162177205|gb|FC352634.1|FC352634
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162168761|gb|FC344751.1|FC344751
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162181782|gb|FC357381.1|FC357381
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162170818|gb|FC347432.1|FC347432
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162230450|gb|FC407391.1|FC407391
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162271841|gb|FC448974.1|FC448974
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162179862|gb|FC355933.1|FC355933
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|22492390|gb|BU052313.1|BU052313
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162241441|gb|FC418580.1|FC418580
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACACAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162200866|gb|FC377061.1|FC377061
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162273886|gb|FC450025.1|FC450025
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162157150|gb|FC333720.1|FC333720
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162157403|gb|FC333492.1|FC333492
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162158553|gb|FC334556.1|FC334556
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162180035|gb|FC356106.1|FC356106
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162265170|gb|FC441257.1|FC441257
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162184252|gb|FC360493.1|FC360493
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162199804|gb|FC376397.1|FC376397
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162176992|gb|FC353669.1|FC353669
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|208363337|gb|DC943559.1|DC943559
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162157748|gb|FC335462.1|FC335462
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162188007|gb|FC364997.1|FC364997
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162199622|gb|FC373274.1|FC373274
EST:     GGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: GGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162161888|gb|FC337964.1|FC337964
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162172762|gb|FC348351.1|FC348351
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100378444|gb|BY968601.1|BY968601
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAG
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAG
EST: gi|100401727|gb|BY954677.1|BY954677
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162179299|gb|FC356248.1|FC356248
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162185211|gb|FC361721.1|FC361721
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162229758|gb|FC404029.1|FC404029
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162180252|gb|FC355569.1|FC355569
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162164433|gb|FC341052.1|FC341052
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162188408|gb|FC364278.1|FC364278
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|208377930|gb|DC910948.1|DC910948
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAA                         AATGATACAAAGAA
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAA
EST: gi|162219994|gb|FC395366.1|FC395366
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100356141|gb|BY946217.1|BY946217
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162167058|gb|FC342520.1|FC342520
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100396783|gb|BY953825.1|BY953825
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATG
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATG
EST: gi|100411150|gb|BY956345.1|BY956345
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162198596|gb|FC374768.1|FC374768
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162153713|gb|FC329116.1|FC329116
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162179937|gb|FC356008.1|FC356008
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|67569716|gb|BJ942540.1|BJ942540
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162196885|gb|FC375162.1|FC375162
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100382988|gb|BY986984.1|BY986984
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162178979|gb|FC354287.1|FC354287
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162182206|gb|FC358221.1|FC358221
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100401795|gb|BY954712.1|BY954712
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTTCT-CGAGACTATGCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTT-CTTCGAGACTATGCC
EST: gi|162211794|gb|FC387458.1|FC387458
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162191214|gb|FC367892.1|FC367892
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|208400102|gb|DC904750.1|DC904750
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162265229|gb|FC441316.1|FC441316
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162154208|gb|FC330339.1|FC330339
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162161116|gb|FC336464.1|FC336464
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100390306|gb|BY952714.1|BY952714
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162180258|gb|FC355263.1|FC355263
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162234140|gb|FC410354.1|FC410354
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162184985|gb|FC362431.1|FC362431
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100390305|gb|BY952713.1|BY952713
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100445798|gb|CJ970097.1|CJ970097
EST:     TCATGGCNTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGNATATCAN                         ACTGANACAAA
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAA
EST: gi|162225773|gb|FC400713.1|FC400713
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162161651|gb|FC339066.1|FC339066
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTC
EST: gi|162276986|gb|FC453084.1|FC453084
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162240980|gb|FC416611.1|FC416611
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162165549|gb|FC340660.1|FC340660
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAG
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAG
EST: gi|100446449|gb|CJ970748.1|CJ970748
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162243208|gb|FC415560.1|FC415560
EST:     GGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: GGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162151096|gb|FC327121.1|FC327121
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162187097|gb|FC362879.1|FC362879
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162195879|gb|FC375612.1|FC375612
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|161970270|gb|EE296251.1|EE296251
EST:     CATGGCGTTGGATCTTCCTCATGGTGGCCACTTGNTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTCTCCATTTTCTTCGAGACTATGCCC
genomic: CATGGCGTTGGATCTTCCTCATGGTGGCCACTTG-TCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|208361638|gb|DC942867.1|DC942867
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCNACTTGTCTCATGGATATCAN                         ACTGATACAAA
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAA
EST: gi|162162498|gb|FC339216.1|FC339216
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162195138|gb|FC368813.1|FC368813
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162192085|gb|FC367298.1|FC367298
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162170542|gb|FC347675.1|FC347675
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162173000|gb|FC348638.1|FC348638
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|100366230|gb|BY967344.1|BY967344
EST:     CATGGCGTTGGATCTTCCTCATGGNTGGC-ACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAG
genomic: CATGGCGTTGGATCTTCCTCATGG-TGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAG
EST: gi|162231324|gb|FC407059.1|FC407059
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162178476|gb|FC354200.1|FC354200
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
EST: gi|162166332|gb|FC342925.1|FC342925
EST:     TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAG                         ACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC
genomic: TCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 27 (downstream exon)
Score: 108

GCCAGCAAACTTTCAGGTGTACACAGCTCTCCTGAAGCCACATGAGCGGATCATGGCGTTGGATCTTCCTCATGGTGGCCACTTGTCTCATGGATATCAGgtacgtcttc ... tggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCCTACAGACTGAACGAGTCCACAGGTTATATCGACTATGATCAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acgtttctccacaatcatgaatttattcacacttcatgcttttcatggcaaacagACTGATACAAAGAAGATTTCAGCCGTTTCCATTTTCTTCGAGACTATGCCCTACAGACTGAACGAGTCCACAGGTTATATCGACTATGATCAG
                                      cttttcat  CT-rich tract
            aatcatgaatttatt  TA-rich tract