1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaagtttgagagagaaaatcaacttcatgatattatcgtttgcagtctaaggcttaatgtatcttgaaaggatcttcagattccctctgcaactgatgtacctcttcaaacagGGACCGTGAGGCGTTTCTTGGAGAAGCACAAGGACAAGATTACTGCTGTAGTCTTTTGCACCTCTAATTCTACTGATACAGACATTTATAAAAG
species | Physcomitrella patens |
transcript | PP1S204_122V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CACAGAAGCAAAAGGTTATCCAAGAGAGCCTGCTGGGCATGTTGCTATAC GGACCGTGAGGCGTTTCTTGGAGAAGCACAAGGACAAGATTACTGCTGTAGEST: gi|162171606|gb|FC347547.1|FC347547
genomic: CACAGAAGCAAAAGGTTATCCAAGAGAGCCTGCTGGGCATGTTGCTATACgtaagtttga ... cttcaaacagGGACCGTGAGGCGTTTCTTGGAGAAGCACAAGGACAAGATTACTGCTGTAG
EST: CACAGAAGCAAAAGGTTATCCAAGAGAGCCTGCTGGGCATGTTGCTATAC GGACCGTGAGGCGTTTCTTGGAGAAGCACAAGGACAAGATTACTGCTGTAG
genomic: CACAGAAGCAAAAGGTTATCCAAGAGAGCCTGCTGGGCATGTTGCTATACgtaagtttga ... cttcaaacagGGACCGTGAGGCGTTTCTTGGAGAAGCACAAGGACAAGATTACTGCTGTAG
gtatcttgaaaggatcttcagattccctctgcaactgatgtacctcttcaaacagGGACCGTGAGGCGTTTCTTGGAGAAGCACAAGGACAAGATTACTGCTGTAGTCTTTTGCACCTCTAATTCTACTGATACAGACATTTATAAAAG
aactgat putative branch site (score: 20)
tacctcttc CT-rich tract