1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtgatttttaatctgctcttatatgggtccatactgtgatctaaagatatacatataattgcataatatgcatatcctgatattttttagattattctacatcaaccgttccttttagcttaatgctgtcatgttatgttcgcccagAGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCATCTTGGTATTG
species | Physcomitrella patens |
transcript | PP1S182_90V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CTTGCAAAGAAGTATCGCGATCCCACTACTCATCAGCACATTCCTTATAG AGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCAEST: gi|162154765|gb|FC331079.1|FC331079
genomic: CTTGCAAAGAAGTATCGCGATCCCACTACTCATCAGCACATTCCTTATAGgtgattttta ... gttcgcccagAGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCA
EST: CTTGCAAAGAAGTATCGCGATCCCACTACTCATCAGCACATTCCTTATAG AGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCAEST: gi|162185975|gb|FC361803.1|FC361803
genomic: CTTGCAAAGAAGTATCGCGATCCCACTACTCATCAGCACATTCCTTATAGgtgattttta ... gttcgcccagAGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCA
EST: CTTGCAAAGAAGTATCGCGATCCCACTACTCATCAGCACATTCCTTATAG AGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCA
genomic: CTTGCAAAGAAGTATCGCGATCCCACTACTCATCAGCACATTCCTTATAGgtgattttta ... gttcgcccagAGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCA
tattctacatcaaccgttccttttagcttaatgctgtcatgttatgttcgcccagAGAGAACAAAAATCTTACTGGAACCGCTCGATATGCAAGTATCAACACTCATCTTGGTATTG
gcttaat putative branch site (score: 13)
ttcgccc putative PPT
atgttat TA-rich tract