1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gttgatctttgtttgtttgcgcaacgtctacttgtaccatctaattttctagtggaatgctatttttgatacatgttgcacctgtttgtatcaataaccctgagcctctgtcaaatagGGAGAACAAAAATCTGACAGGGACTGCTCGGTATGCAAGCATCAACACTCATCTTGGTATTG
species | Physcomitrella patens |
transcript | PP1S182_82V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CTTGCCAAGAAGTACCGCGACCCTTCCACGCATCAGCATATTCCCTACAG GGAGAACAAAAATCTGACAGGGACTGCTCGGTATGCAAGCATCAACACTCAEST: gi|162214342|gb|FC390061.1|FC390061
genomic: CTTGCCAAGAAGTACCGCGACCCTTCCACGCATCAGCATATTCCCTACAGgttgatcttt ... tgtcaaatagGGAGAACAAAAATCTGACAGGGACTGCTCGGTATGCAAGCATCAACACTCA
EST: CTTGCCAAGAAGTACCGCGACCCTTCCACGCATCAGCATATTCCCTACAG GGAGAACAAAAATCTGACAGGGACTGCTCGGTATGCAAGCATCAACACTCA
genomic: CTTGCCAAGAAGTACCGCGACCCTTCCACGCATCAGCATATTCCCTACAGgttgatcttt ... tgtcaaatagGGAGAACAAAAATCTGACAGGGACTGCTCGGTATGCAAGCATCAACACTCA
ttttgatacatgttgcacctgtttgtatcaataaccctgagcctctgtcaaatagGGAGAACAAAAATCTGACAGGGACTGCTCGGTATGCAAGCATCAACACTCATCTTGGTATTG
caataac putative branch site (score: 3)
cctctgtc putative PPT
tatcaataa TA-rich tract