1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tttctccttacgaagacaaaaattgcattattgataaaaagcggtgagaggttatttgcgaaagtgaattcaaattgcttactttactcttcatctgcagTATTGAGTTTGATCGGGATGATGAATTCTTTGCGACAGCGGGTGTATCTCGGCGCATCAAAATATTCGACTTTGCAACG
species | Physcomitrella patens |
transcript | PP1S180_148V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GCTGAGCTTCACCGTGGAGATTTATTTCATAATTCAAATATTGTATCTAG TATTGAGTTTGATCGGGATGATGAATTCTTTGCGACAGCGGGTGTATCTCG
genomic: GCTGAGCTTCACCGTGGAGATTTATTTCATAATTCAAATATTGTATCTAGgtgagatatc ... tcatctgcagTATTGAGTTTGATCGGGATGATGAATTCTTTGCGACAGCGGGTGTATCTCG
gagaggttatttgcgaaagtgaattcaaattgcttactttactcttcatctgcagTATTGAGTTTGATCGGGATGATGAATTCTTTGCGACAGCGGGTGTATCTCGGCGCATCAAAATATTCGACTTTGCAACG
tgcttac putative branch site (score: 5)
cttactttactcttc CT-rich tract
aattcaaatt TA-rich tract