1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
...tagtttatcttctttgtcgcaaatgttaaggtggagcttagatcactattgtacatcagcttaagtttcaaaaacttcaagctgatcatgaccttggcagTTGGAAAGCGGGTCCGAGACCAGAAGATGGTGTGTGGGCACCCTGGTGGTATTCAAGTGTTCATAAGTCAACAGAGTTTGTTTCACCTCCACCATTTGCA
species | Physcomitrella patens |
transcript | PP1S180_110V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CGGAGTCTATGTTCAGCAATTGATATTCCATTTCAGTCATCAATGCTGAG TTGGAAAGCGGGTCCGAGACCAGAAGATGGTGTGTGGGCACCCTGGTGGTAEST: gi|162255545|gb|FC431335.1|FC431335
genomic: CGGAGTCTATGTTCAGCAATTGATATTCCATTTCAGTCATCAATGCTGAGgtatgcacct ... accttggcagTTGGAAAGCGGGTCCGAGACCAGAAGATGGTGTGTGGGCACCCTGGTGGTA
EST: CGGAGTCTATGTTCAGCAATTGATATTCCATTTCAGTCATCAATGCTGAG TTGGAAAGCGGGTCCGAGACCAGAAGATGGTGTGTGGGCACCCTGGTGGTA
genomic: CGGAGTCTATGTTCAGCAATTGATATTCCATTTCAGTCATCAATGCTGAGgtatgcacct ... accttggcagTTGGAAAGCGGGTCCGAGACCAGAAGATGGTGTGTGGGCACCCTGGTGGTA
ctattgtacatcagcttaagtttcaaaaacttcaagctgatcatgaccttggcagTTGGAAAGCGGGTCCGAGACCAGAAGATGGTGTGTGGGCACCCTGGTGGTATTCAAGTGTTCATAAGTCAACAGAGTTTGTTTCACCTCCACCATTTGCA
agctgat putative branch site (score: 3)
ttaagtttcaaaaa TA-rich tract