1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatgtgctcaaggaaattgtttttcatagttttttcaatctttcaaactcattttaacatggaagttctgttagtttttagtagttccgttcttgtgtctaacatactggtatggctagtctcaatacattcttatgtattttgcagAAAGCTCTATGGGTAGCAAAACGAACCTACTCCACATTATGCATCAATATTTAGTCAGTACTGATCCTCCTAATTAGCCGACAGTAGAATTGTAGATGCG
species | Physcomitrella patens |
transcript | PP1S158_146V6.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: AGAAGTCAGTTCTGTTCTCTTGCTACCACTGCGGAAAATCACATGAATTT AAAGCTCTATGGGTAGCAAAACGAACCTACTCCACATTATGCATCAATATTEST: gi|67693140|gb|BJ953373.1|BJ953373
genomic: AGAAGTCAGTTCTGTTCTCTTGCTACCACTGCGGAAAATCACATGAATTTgtatgtgctc ... tattttgcagAAAGCTCTATGGGTAGCAAAACGAACCTACTCCACATTATGCATCAATATT
EST: AGAAGTCAGTTCTGTTCTCTTGCTACCACTGCGGAAAATCACATGAATTT AAAGCTCTATGGGTAGCAAAACGAACCTACTCCACATTATGCATCAATATT
genomic: AGAAGTCAGTTCTGTTCTCTTGCTACCACTGCGGAAAATCACATGAATTTgtatgtgctc ... tattttgcagAAAGCTCTATGGGTAGCAAAACGAACCTACTCCACATTATGCATCAATATT
ttgtgtctaacatactggtatggctagtctcaatacattcttatgtattttgcagAAAGCTCTATGGGTAGCAAAACGAACCTACTCCACATTATGCATCAATATTTAGTCAGTACTGATCCTCCTAATTAGCCGACAGTAGAATTGTAGATGCG
gtctaac putative branch site (score: 2)
attcttatgtatttt TA-rich tract