1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgagtttgacgctctccattttttacactttccggtctttgataggaaagctgcacaagattttctgctgtgtcacctccgcttacaatcacttttgtcattcttagtttaagacatgacttcttacaacgtcatttctgagcagGTGCGGAGATATCAAGCACCTGATGAACATCCTTTCTTCCCCGAGGACTTGCCTGAGCCTATTTTACCCAGCCTCCCCAAGTCCAAA
species | Physcomitrella patens |
transcript | PP1S142_106V6.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GTTCCCTAGTTGAGTTTATGCTCAAAGAGACAGAGACCCTGCATGCCAAA GTGCGGAGATATCAAGCACCTGATGAACATCCTTTCTTCCCCGAGGACTTG
genomic: GTTCCCTAGTTGAGTTTATGCTCAAAGAGACAGAGACCCTGCATGCCAAAgtgagtttga ... ttctgagcagGTGCGGAGATATCAAGCACCTGATGAACATCCTTTCTTCCCCGAGGACTTG
acttttgtcattcttagtttaagacatgacttcttacaacgtcatttctgagcagGTGCGGAGATATCAAGCACCTGATGAACATCCTTTCTTCCCCGAGGACTTGCCTGAGCCTATTTTACCCAGCCTCCCCAAGTCCAAA
ttcttac putative branch site (score: 2)
tcatttct putative PPT
ttagtttaa TA-rich tract