1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ctcgctgatgattcttacttcagaagatttggagaatacaacttgtttctttcaacagctcctctagtcccttctaataacctgttgtgacgcatttcagAAAAGATTCGATGAAGCAGTTTCTGTGTTGAAGAGGTTGTATCCTAGTGGCGAAGGCATTGCAGCATATGATGAAGTGGCAGCCGCCGCTTCAGAGTGGC
species | Physcomitrella patens |
transcript | PP1S78_63V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CAGTTCTCTTCTGTTTTCTGCCCGAATCCCCTCGATGGTATGTTCGTCAG AAAAGATTCGATGAAGCAGTTTCTGTGTTGAAGAGGTTGTATCCTAGTGGC
genomic: CAGTTCTCTTCTGTTTTCTGCCCGAATCCCCTCGATGGTATGTTCGTCAGgtattgctct ... cgcatttcagAAAAGATTCGATGAAGCAGTTTCTGTGTTGAAGAGGTTGTATCCTAGTGGC
tttctttcaacagctcctctagtcccttctaataacctgttgtgacgcatttcagAAAAGATTCGATGAAGCAGTTTCTGTGTTGAAGAGGTTGTATCCTAGTGGCGAAGGCATTGCAGCATATGATGAAGTGGCAGCCGCCGCTTCAGAGTGGC
taataac putative branch site (score: 1)
ttctaataa TA-rich tract