1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...gtttgagaagcatactttgtacatcccgtagcagcatgcaagttgtttcaactttaaactaattgaagcatagctaacagtcgttgtggatttgtggcagGATATTGGAATGGGGTGAGGATAGACGCATGGATAACAAGCGAAACAATTTGGCTAGATTTGCTGTGTTTTGGACTCTCCAA
species | Physcomitrella patens |
transcript | PP1S69_206V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGCTTGGCTGTGGCGTGGGGCCTTCGATTGTCAATCTTTCTTCTGTTGCG GATATTGGAATGGGGTGAGGATAGACGCATGGATAACAAGCGAAACAATTTEST: gi|208364468|gb|DC958037.1|DC958037
genomic: TGCTTGGCTGTGGCGTGGGGCCTTCGATTGTCAATCTTTCTTCTGTTGCGgtacggagtt ... tttgtggcagGATATTGGAATGGGGTGAGGATAGACGCATGGATAACAAGCGAAACAATTT
EST: TGCTTGGCTGTGGCGTGGGGCCTTCGATTGTCAATCTTTCTTCTGTTGCG GATATTGGAATGGGGTGAGGATAGACGCATGGATAACAAGCGAAACAATTT
genomic: TGCTTGGCTGTGGCGTGGGGCCTTCGATTGTCAATCTTTCTTCTGTTGCGgtacggagtt ... tttgtggcagGATATTGGAATGGGGTGAGGATAGACGCATGGATAACAAGCGAAACAATTT
tttcaactttaaactaattgaagcatagctaacagtcgttgtggatttgtggcagGATATTGGAATGGGGTGAGGATAGACGCATGGATAACAAGCGAAACAATTTGGCTAGATTTGCTGTGTTTTGGACTCTCCAA
agctaac putative branch site (score: 8)
tttaaactaattgaa TA-rich tract