1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...gtttgctgatgaagttcgaggtcatcttatatttggatgaagacttagaaatcttaatcgcttgttgtattctctgacagtacgctgtttcatgttttagATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC
species | Physcomitrella patens |
transcript | PP1S64_201V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TCGTATTTTAAACCCAACCTGACCATAAACTTGGTGGATGACTTCACTAG ATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAACEST: gi|100420625|gb|BY993434.1|BY993434
genomic: TCGTATTTTAAACCCAACCTGACCATAAACTTGGTGGATGACTTCACTAGgtgcccatat ... catgttttagATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC
EST: TCGTATTTTAAACCCAACCTGACCATAAACTTGGTGGATGACTTCACTAG ATATCCGAAAGTTGGCGCCCCACCAC-AATTGCTGAACACCTTTCEST: gi|162210481|gb|FC386777.1|FC386777
genomic: TCGTATTTTAAACCCAACCTGACCATAAACTTGGTGGATGACTTCACTAGgtgcccatat ... catgttttagATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAACACCTTTC
EST: TCGTATTTTAAACCCAACCTGACCATAAACTTGGTGGATGACTTCACTAG ATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC
genomic: TCGTATTTTAAACCCAACCTGACCATAAACTTGGTGGATGACTTCACTAGgtgcccatat ... catgttttagATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC
tagaaatcttaatcgcttgttgtattctctgacagtacgctgtttcatgttttagATATCCGAAAGTTGGCGCCCCACCACCAATTGCTGAAC
ctctgac putative branch site (score: 9)
ctgtttc putative PPT
atcttaat TA-rich tract