1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...actacttcatgctgggatcgctttgtgagatgttctaaacagttgctaaacgataatgatttaaagatcaactattaattttcgacgttgctcgtggcagCCAAGACGGAATGACTTGGACATGAATCAACATGTGAATAATGTAACGTATGTATGTTGGATGCTTGAG
species | Physcomitrella patens |
transcript | PP1S4_409V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AGAAGATCGGGAGGCCAGGTGTAGCCCAGTTTGAGTGCTCCAATCTGATG CCAAGACGGAATGACTTGGACATGAATCAACATGTGAATAATGTAACGTATEST: gi|162279761|gb|FC455669.1|FC455669
genomic: AGAAGATCGGGAGGCCAGGTGTAGCCCAGTTTGAGTGCTCCAATCTGATGgtcagtatct ... ctcgtggcagCCAAGACGGAATGACTTGGACATGAATCAACATGTGAATAATGTAACGTAT
EST: AGAAGATCGGGAGGCCAGGTGTAGCCCAGTTTGAGTGCTCCAATCTGATG CCAAGACGGAATGACTTGGACATGAATCAACATGTGAATAATGTAACGTAT
genomic: AGAAGATCGGGAGGCCAGGTGTAGCCCAGTTTGAGTGCTCCAATCTGATGgtcagtatct ... ctcgtggcagCCAAGACGGAATGACTTGGACATGAATCAACATGTGAATAATGTAACGTAT
ctaaacgataatgatttaaagatcaactattaattttcgacgttgctcgtggcagCCAAGACGGAATGACTTGGACATGAATCAACATGTGAATAATGTAACGTATGTATGTTGGATGCTTGAG
tattaat putative branch site (score: 1)
ataatgatttaaagat TA-rich tract