1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...tcaaattttgtcaatggacggtttatttattttccgttctgtatttgatatgcatagtttattacagcgtgagtttgacggaggtatttgcatgaaccagGTGTCAATATTCTTTTCTGAGTCGCCCACTAATCCTTACCTAAGGTGTATCGATATTGAATTAGTATCCAAACTGTGTCACGAGCACGGTGCTCTCGTCT
species | Physcomitrella patens |
transcript | PP1S49_246V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TCGATCCTGCGGACATTTCTGCTCTTCAGCATGCACTGGAGCAAAACAAA GTGTCAATATTCTTTTCTGAGTC
genomic: TCGATCCTGCGGACATTTCTGCTCTTCAGCATGCACTGGAGCAAAACAAAgtaagtttta ... catgaaccagGTGTCAATATTCTTTTCTGAGTC
tgatatgcatagtttattacagcgtgagtttgacggaggtatttgcatgaaccagGTGTCAATATTCTTTTCTGAGTCGCCCACTAATCCTTACCTAAGGTGTATCGATATTGAATTAGTATCCAAACTGTGTCACGAGCACGGTGCTCTCGTCT
gtttgac putative branch site (score: 13)
atagtttatta TA-rich tract