1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgcatgcattttcatatgttgtcctccttttttgccttgtgatcttcacttccgagacaggatttatctggttgtgtcaacagctccctgtttctgcaaggtaagacacgcttgtcaacttatacgtcagtaacaggagccagcagatacttactttttttttttgtctcttgcagCCACCGTGGGATACCGACCGTGGAAACAATTATATTATTCATTATACGTATGGATGTGATTACAGCATGAAG
species | Physcomitrella patens |
transcript | PP1S48_116V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CAGCTTTGCATGGGATTAGACATACGTTGGTCAAAGATTTTATGTTACAG CCACCGTGGGATACCGACCGTGGAAACAATTATATTATTCATTATACGTAT
genomic: CAGCTTTGCATGGGATTAGACATACGTTGGTCAAAGATTTTATGTTACAGgtgcatgcat ... tctcttgcagCCACCGTGGGATACCGACCGTGGAAACAATTATATTATTCATTATACGTAT
atacgtcagtaacaggagccagcagatacttactttttttttttgtctcttgcagCCACCGTGGGATACCGACCGTGGAAACAATTATATTATTCATTATACGTATGGATGTGATTACAGCATGAAG
tacttac putative branch site (score: 1)
tacttacttttttttt CT-rich tract
agatacttactttttt TA-rich tract