1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtattgaccgattcgacaccccaacggacattaatcgcacggtttgaatcccctcccatagctccaagcttaaaatgattcctgacacgtattggtgggttctgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGGACTTGTGTGCGGCCATAACGACACCGCGGGGCATCCGATGTATACTTT
species | Physcomitrella patens |
transcript | PP1S485_2V6.3 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|162222426|gb|FC398005.1|FC398005
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGACGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|7047034|gb|AW476928.1|AW476928
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|37846234|gb|BJ604242.1|BJ604242
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: TGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|162159249|gb|FC335102.1|FC335102
genomic: TGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: AGGTTCTGTTTCATCACGGATCTGAACATGCAGEST: gi|37822701|gb|BJ580767.1|BJ580767
genomic: AGGTTCTGTTTCATCACGGATCTGAACAT---Ggtattgaccg ... tgacaagc
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|37831570|gb|BJ589582.1|BJ589582
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: TTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|208400527|gb|DC925277.1|DC925277
genomic: TTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|208385996|gb|DC956512.1|DC956512
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|37845798|gb|BJ603806.1|BJ603806
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|37833033|gb|BJ591045.1|BJ591045
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|208394827|gb|DC924102.1|DC924102
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|162259231|gb|FC436161.1|FC436161
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|162270838|gb|FC446867.1|FC446867
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: AGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|208383478|gb|DC923630.1|DC923630
genomic: AGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|208398656|gb|DC920551.1|DC920551
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|208381316|gb|DC919206.1|DC919206
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGEST: gi|162208831|gb|FC384967.1|FC384967
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
EST: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATG GTTTTGAGAACACGACGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
genomic: GGACCAGACCAAGGCCTTCGAGGTTCTGTTTCATCACGGATCTGAACATGgtattgaccg ... tgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACG
atagctccaagcttaaaatgattcctgacacgtattggtgggttctgacaagcagGTTTTGAGAACACGATGACACCGTGTTGCATTGGGAAAGCGGTTCCTCACGGACTTGTGTGCGGCCATAACGACACCGCGGGGCATCCGATGTATACTTT
ttctgac putative branch site (score: 2)
ttaaaatgatt TA-rich tract