1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...ggcaaagttcttttgtgactttttaggtattggtttatgcaggtctaaatcgagcacgaaatttgctaaccaaacataaaattctgttatgtcatcacagTTTAGCAATGATGGATTCCAAAAATCCCTTGAAGGTGTTAGTTATTGGAAGCCTGTTCAATTTGGTTGGGGACGTCGTTCTATGTTCGTTTCTCGGTTAT
species | Physcomitrella patens |
transcript | PP1S47_276V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGCATGGCCAGCAGTTCTTGTTAGTCTGGTGTCACAAAGTGCCAG TTTAGCAATGATGGATTCCAAAAATCCCTTGAAGGTGTTAGTTATTGGAAGEST: gi|162185138|gb|FC362272.1|FC362272
genomic: GGCATGGCCAGCAGTTCTTGTTAGTCTGGTGTCACAAAGTGCCAGgtgaacactt ... gtcatcacagTTTAGCAATGATGGATTCCAAAAATCCCTTGAAGGTGTTAGTTATTGGAAG
EST: GCTTTGGCATGGCCAGCAGTTCTTGTTAGTCTGGTGTCACAAAGTGCCAG TTTAGCAATGATGGATTCCAAAAATCCCTTGAAGGTGTTAGTTATTGGAAG
genomic: GCTTTGGCATGGCCAGCAGTTCTTGTTAGTCTGGTGTCACAAAGTGCCAGgtgaacactt ... gtcatcacagTTTAGCAATGATGGATTCCAAAAATCCCTTGAAGGTGTTAGTTATTGGAAG
taaatcgagcacgaaatttgctaaccaaacataaaattctgttatgtcatcacagTTTAGCAATGATGGATTCCAAAAATCCCTTGAAGGTGTTAGTTATTGGAAGCCTGTTCAATTTGGTTGGGGACGTCGTTCTATGTTCGTTTCTCGGTTAT
tgctaac putative branch site (score: 1)
ataaaattctgttat TA-rich tract