1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...atttctactggtgtacttaataggagtgcgaagttgtagtgtatgtgagacaagttcattcatctaattaacatcctttttttttgttactcctatgcagCATCAAGGCCACCCACCAGCTATCAAAATTCAGCACAGAATTCTGCTCGAGGTACACCACGTTTGAGTCCAAGATTGACTCCAAGTGTATCACCCAAACA
species | Physcomitrella patens |
transcript | PP1S478_14V6.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TACAGATTCATCTTTGACTAGTGAGGAGCGTGGCTATCAGCA---T---G CATCAAGGCCACCCACCAGCTATCAAAATTCAGCACAGAATTCTGCTCGAGEST: gi|100390557|gb|BY952965.1|BY952965
genomic: TACAGATTCATCTTTGACTAGTGAGGAGCGTGGCTATCAGCATGGTGAGGgtaaagttat ... tcctatgcagCATCAAGGCCACCCACCAGCTATCAAAATTCAGCACAGAATTCTGCTCGAG
EST: TACAGATTCATCTTTGACTAGTGAGGAGCGTGGCTATCAGCATGGTGAGG CATCAAGGCCACCCACCAGCTATCAAAATTCAGCACAGAATTCTGCTCGAG
genomic: TACAGATTCATCTTTGACTAGTGAGGAGCGTGGCTATCAGCATGGTGAGGgtaaagttat ... tcctatgcagCATCAAGGCCACCCACCAGCTATCAAAATTCAGCACAGAATTCTGCTCGAG
tgagacaagttcattcatctaattaacatcctttttttttgttactcctatgcagCATCAAGGCCACCCACCAGCTATCAAAATTCAGCACAGAATTCTGCTCGAGGTACACCACGTTTGAGTCCAAGATTGACTCCAAGTGTATCACCCAAACA
aattaac putative branch site (score: 2)
catcctttttttttgt CT-rich tract
taattaacatcctttt TA-rich tract