1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...atgcatgaacccgcaatacttgttcggttatgagcagtctataatgtcttgcataacaatcttctctgacctgtgttgtatgttctggttggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCAGTTCGATGAACGTTCCACTAGGTTATTTCACTGGATTGAAATCAACCT
species | Physcomitrella patens |
transcript | PP1S473_1V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGT GCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCEST: gi|162256900|gb|FC433002.1|FC433002
genomic: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGTgtaagttctt ... ggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
EST: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGT GCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCEST: gi|162256899|gb|FC433001.1|FC433001
genomic: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGTgtaagttctt ... ggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
EST: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGT GCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCEST: gi|162185767|gb|FC362323.1|FC362323
genomic: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGTgtaagttctt ... ggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
EST: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGT GCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCEST: gi|67694722|gb|BJ954955.1|BJ954955
genomic: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGTgtaagttctt ... ggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
EST: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGT GCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCEST: gi|162265407|gb|FC440733.1|FC440733
genomic: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGTgtaagttctt ... ggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
EST: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGT GCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
genomic: CTACCCCACATTTTGCAGTGCGCAACCCGTCAGTAATTCATTTTTGATGTgtaagttctt ... ggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTC
gtcttgcataacaatcttctctgacctgtgttgtatgttctggttggaaaagcagGCAGCTGCCCCTTTTTGCATTATCTTATGGCTGCTGGTGGAGTTATCCTTCAGTTCGATGAACGTTCCACTAGGTTATTTCACTGGATTGAAATCAACCT
ctctgac putative branch site (score: 3)
ataacaat TA-rich tract