1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaaactcgccgaatctcagtggtcattctctactgaagcgcctgatgctgcagagaaagtcacgcatctaatctcctgatagtcatacgatatcctctgaactgtatgtctaaagccttatgttggacacagtatggcttctgagttaacttatttctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
species | Physcomitrella patens |
transcript | PP1S46_64V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTG GTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGGEST: gi|208353889|gb|DC942787.1|DC942787
genomic: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTGgtaaactcgc ... ctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
EST: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTG GTGAACAATGCAGGGTTAN-GGNAACCGANCGCACTCAAACTGTGGANGGGEST: gi|162159315|gb|FC334622.1|FC334622
genomic: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTGgtaaactcgc ... ctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGGG
EST: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTG GTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGGEST: gi|208356778|gb|DC906440.1|DC906440
genomic: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTGgtaaactcgc ... ctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
EST: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTG GTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGGEST: gi|18325412|gb|BJ157408.1|BJ157408
genomic: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTGgtaaactcgc ... ctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
EST: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTG GTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGGEST: gi|162189180|gb|FC365987.1|FC365987
genomic: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTGgtaaactcgc ... ctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
EST: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTG GTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
genomic: AAGACTTTGCTGCTGAATACACATCATCTGGTCGACCTCTTCACATACTGgtaaactcgc ... ctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
aaagccttatgttggacacagtatggcttctgagttaacttatttctggatgaagGTGAACAATGCAGGGTTAATGGAAACCGAGCGCACTCAAACTGTGGATGG
agttaac putative branch site (score: 8)
cttatttct CT-rich tract
ttaacttattt TA-rich tract