1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagtggagaaaattgttgaggtttcatgctacttcgaaaatacgtatggtatcatctgagcctttgtgttctgtgctgattgggtttcgtttttgcagAAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACCTGTACTATTGGGAATCTTGGCCAACGCCCAATATATATCAAAGTTAGAA
species | Physcomitrella patens |
transcript | PP1S395_5V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAA AAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACCEST: gi|37841910|gb|BJ599918.1|BJ599918
genomic: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAAgtaagtggag ... gtttttgcagAAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACC
EST: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAA AAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACCEST: gi|208367202|gb|DC947866.1|DC947866
genomic: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAAgtaagtggag ... gtttttgcagAAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACC
EST: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAA AAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACCEST: gi|208367661|gb|DC955006.1|DC955006
genomic: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAAgtaagtggag ... gtttttgcagAAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACC
EST: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAA AAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACC
genomic: ATACTGAAGAAGAGCTTCCCCCAGAATTTAAATTTTTCTTACCTATCCAAgtaagtggag ... gtttttgcagAAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACC
gtatggtatcatctgagcctttgtgttctgtgctgattgggtttcgtttttgcagAAAAGCTGAAGGGACCATGAAGGAATGCTTTGGCGCACCTCATTTTTGACCTGTACTATTGGGAATCTTGGCCAACGCCCAATATATATCAAAGTTAGAA
tgctgat putative branch site (score: 1)
tttcgttttt putative PPT
ttttt TA-rich tract