1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtctgtgtctgtccaagtcggaaccaaagattaattctggtgagggttagattttgcttcaatgaagttcagccagttgatgattattttccttcttacctgaaggtataaattggtgatagaacttgtttggagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCGTAGCGAAGTTTTTTTTCGCAG
species | Physcomitrella patens |
transcript | PP1S295_30V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|100414507|gb|BY992807.1|BY992807
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|162260165|gb|FC436300.1|FC436300
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208363026|gb|DC946909.1|DC946909
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCCATCTATTTCACTCAG GCNTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208385598|gb|DC937143.1|DC937143
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTNGCATCTGGATCTACTTGTGGTTCTCTCEST: gi|208367886|gb|DC950953.1|DC950953
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|162278111|gb|FC453930.1|FC453930
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208377957|gb|DC910961.1|DC910961
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208375008|gb|DC956404.1|DC956404
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208374777|gb|DC932046.1|DC932046
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|162278110|gb|FC453929.1|FC453929
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208349948|gb|DC913656.1|DC913656
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208361176|gb|DC954282.1|DC954282
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: CCGATGTTTCCCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208390738|gb|DC937894.1|DC937894
genomic: CCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCAA-CGCTCTCGTEST: gi|100364489|gb|BY984629.1|BY984629
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGT
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GGCTTGCATCTGGATCTACCTGTGGTTCTCTCCTAGCGCTCTEST: gi|162260166|gb|FC436301.1|FC436301
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagG-CTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCT
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|18361916|gb|BJ193983.1|BJ193983
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: TCTCCGGCCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCEST: gi|208386340|gb|DC932836.1|DC932836
genomic: TCTCCGGCC-GATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATC
EST: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCEST: gi|208387111|gb|DC941283.1|DC941283
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
EST: GTCTCCGGCCGATGTTTCCCATCATAAATGCCGCAATCTATTTCACTCAG GCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
genomic: GTCTCCGGCCGATGTTTCTCATCATAAATGCCGCAATCTATTTCACTCAGgtctgtgtct ... gagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGC
tttccttcttacctgaaggtataaattggtgatagaacttgtttggagagtgcagGCTTGCATCTGGATCTACTTGTGGTTCTCTCCTAGCGCTCTCGTGATGTGCGTAGCGAAGTTTTTTTTCGCAG
ttcttac putative branch site (score: 2)
tataaatt TA-rich tract