1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtgagtgtcagctttgaagagagtctactctagaagtttaggattctgtttttttggttgtcttggtcacctaattcgtatggtgactaccacgctcattcaagccttgcactcagaagtggaacctcccaatgcttactatacgtcgattgaattgcagGTTGCTACCGTCCAGGGCCTATCTGGAACTGGTTCTCTTCGCCTAGGTGCTGCTTTCTTACAACGTTACTTCCCTGGCACCACGGTTTACATCTCTTCTC
species | Physcomitrella patens |
transcript | PP1S245_98V6.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATGGAAACATTACATTGTGTTCCCAGEST: gi|100360663|gb|BY965570.1|BY965570
genomic: ATGGAAACATTACATTGTGTTCCCAG
EST: CAGCTGAGTTGCTACTGGGAGCCGACAATGCTGCCATTAAAGAGAATCGG GTTGCTACCGTCCAGGGCCTATCTGGAACTGGTTCTCTTCGCCTAGGTGCT
genomic: CAGCTGAGTTGCTACTGGGAGCCGACAATGCTGCCATTAAAGAGAATCGGgtgagtgtca ... tgaattgcagGTTGCTACCGTCCAGGGCCTATCTGGAACTGGTTCTCTTCGCCTAGGTGCT
cttgcactcagaagtggaacctcccaatgcttactatacgtcgattgaattgcagGTTGCTACCGTCCAGGGCCTATCTGGAACTGGTTCTCTTCGCCTAGGTGCTGCTTTCTTACAACGTTACTTCCCTGGCACCACGGTTTACATCTCTTCTC
tgcttac putative branch site (score: 92)
ttactata TA-rich tract