1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ttaaatgattgttttgacaatattatatctgaaccatctgatggagtactcttatttgttttgtcagctgtaactaatttcttgttcttctgaatgatagTCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAGGGTTAAAACGCATGAATCGAAATCATGTTCATTTTGCTACTGGCTTGCC
species | Physcomitrella patens |
transcript | PP1S213_28V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAG TCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAGEST: gi|100414501|gb|BY992804.1|BY992804
genomic: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAGgtgatttgca ... tgaatgatagTCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAG
EST: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAG TCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAGEST: gi|22492595|gb|BU052518.1|BU052518
genomic: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAGgtgatttgca ... tgaatgatagTCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAG
EST: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAG TCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAGEST: gi|208399295|gb|DC912482.1|DC912482
genomic: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAGgtgatttgca ... tgaatgatagTCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAG
EST: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAG TCTGTGTNCATGGCACGTACGA
genomic: GGAATCTGGACAACTTTTGTCGTTGGTTACATCTCCTTCACAAATTCCAGgtgatttgca ... tgaatgatagTCTGTGTTCATGGCACGTACGA
gtactcttatttgttttgtcagctgtaactaatttcttgttcttctgaatgatagTCTGTGTTCATGGCACGTACGAGAGATTTATGGACAGTATCTGGCAAGAAGGGTTAAAACGCATGAATCGAAATCATGTTCATTTTGCTACTGGCTTGCC
aactaat putative branch site (score: 4)
tttcttgttcttct CT-rich tract
ttatttgtttt TA-rich tract