1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ccatttatgcggatcaattatttaaaacttaatactctctgccaatggaaatattctttatgttggtcatcttggatgcttacacgtagctggatggcagATATTTGGTGACCCGGAAGCTGCAGATCTTGTGTTTACTAGTGGTATGGATACTCTTGTAATAGGCATAAGCCTGACCACTCAGGTGATTTTTAATG
species | Physcomitrella patens |
transcript | PP1S140_172V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGGGTGCGTCCA-TGCAAGTGGAA-TGTGA-TCC-GCTGCAAAG-CCA-T ATATT-GGTGACCCG-AANCTGCA
genomic: GGGGTGCGTTCAATGCAAGTGGAAATGTGAATCCCGCTGCAGAGGCCAATgtaagttcga ... tggatggcagATATTTGGTGACCCGGAAGCTGCA
tggaaatattctttatgttggtcatcttggatgcttacacgtagctggatggcagATATTTGGTGACCCGGAAGCTGCAGATCTTGTGTTTACTAGTGGTATGGATACTCTTGTAATAGGCATAAGCCTGACCACTCAGGTGATTTTTAATG
tgcttac putative branch site (score: 1)
atattctttatgtt TA-rich tract