1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgaatctcacgttctcatacttttcgtttaatcagaaagctgcattatctgcattatagtatatgcaatcatcaaaatacttcactgataattcgtttgttttgcagAAGTAAGCAATCAAATGTTGGAGCTGTACGAGCAGAACAAAACCAATGGTCCAACGGGTTCGCTTGCCAATGATCCAAGTCCCAGCGAATTGAACCGGGG
species | Physcomitrella patens |
transcript | PP1S119_132V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AGATAAAGTGTGGTGGCAGCAGTTTGACGTCACTCCTAGACAATTGGAAG AAGTAAGCAATCAAATGTTGGAGCTGTACGAGCAGAACAAAACCAATGGTC
genomic: AGATAAAGTGTGGTGGCAGCAGTTTGACGTCACTCCTAGACAATTGGAAGgtgaatctca ... tgttttgcagAAGTAAGCAATCAAATGTTGGAGCTGTACGAGCAGAACAAAACCAATGGTC
attatagtatatgcaatcatcaaaatacttcactgataattcgtttgttttgcagAAGTAAGCAATCAAATGTTGGAGCTGTACGAGCAGAACAAAACCAATGGTCCAACGGGTTCGCTTGCCAATGATCCAAGTCCCAGCGAATTGAACCGGGG
cactgat putative branch site (score: 4)
tttgtttt putative PPT
atcaaaata TA-rich tract