1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tgtgatcccacctccgtagcccctaggtgaacgtacagaaagcaatgtgtcctggtgatgtcgtgagttttgatgaacttatgctgtggttgtgaaccagGAAATAAGTTTGTTGAGTAAATTGAGACATGAGAACATTGTACAGTACATTGGCACCGAAACG
species | Physcomitrella patens |
transcript | PP1S10_200V6.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGGTTTTGGATGATCACAAATCAAAGGAAAGTGTCAAGCAGTTAGGACAG GAAATAAGTTTGTTGAGTAAATTGAGACATGAGAACATTGTACAGTACATTEST: gi|162166784|gb|FC342961.1|FC342961
genomic: TGGTTTTGGATGATCACAAATCAAAGGAAAGTGTCAAGCAGTTAGGACAGgtgtgttcag ... tgtgaaccagGAAATAAGTTTGTTGAGTAAATTGAGACATGAGAACATTGTACAGTACATT
EST: TGGTTTTGGATGATCACAAATCAAAGGAAAGTGTCAAGCAGTTAGGACAG GAAATAAGTTTGTTGAGTAAATTGAGACATGAGAACATTGTACAGTACATT
genomic: TGGTTTTGGATGATCACAAATCAAAGGAAAGTGTCAAGCAGTTAGGACAGgtgtgttcag ... tgtgaaccagGAAATAAGTTTGTTGAGTAAATTGAGACATGAGAACATTGTACAGTACATT
tgtgtcctggtgatgtcgtgagttttgatgaacttatgctgtggttgtgaaccagGAAATAAGTTTGTTGAGTAAATTGAGACATGAGAACATTGTACAGTACATTGGCACCGAAACG
ttttgat putative branch site (score: 6)
ttttgat TA-rich tract