1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtactctagtactatagccatttcttgggggaaatttgaccttcctatttttctttgcctatttcgtcctcaggactgctacaaatttctgactaatgcttttgacagATGACTTGCGAGATATGTTTTGAGGTGCATCCGTTTGAAAAAATGAGGGCACCTAGATGCGGTCACTATTTCTGTGAGACCTGTTGGACAG
species | Physcomitrella patens |
transcript | PP1S9_199V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCGGTTTACTGGAGAAACCCGCTACCAGCAAAAGACAAACTCAAACAGAG ATGACTTGCGAGATATGTTTTGAGGTGCATCCGTTTGAAAAAATGAGGGCAEST: gi|162156717|gb|FC333560.1|FC333560
genomic: TCGGTTTACTGGAGAAACCCGCTACCAGCAAAAGACAAACTCAAACAGAGgtactctagt ... cttttgacagATGACTTGCGAGATATGTTTTGAGGTGCATCCGTTTGAAAAAATGAGGGCA
EST: CTCAAACAGAG ATGACTTGCGAGATATGTTTTGAGGTGCATCCCGTTTGAAAAAATGAGGGCEST: gi|162179661|gb|FC355719.1|FC355719
genomic: CTCAAACAGAGgtactctagt ... cttttgacagATGACTTGCGAGATATGTTTTGAGGTGCAT-CCGTTTGAAAAAATGAGGGC
EST: TCGGTTTACTGGAGAAACCCGCTACCAGCAAAAGACAAACTCAAACAGAG ATGACTTGCGAGATATGTTTTGAGGTGCATCCGTTTGAAAAAATGAGGGCA
genomic: TCGGTTTACTGGAGAAACCCGCTACCAGCAAAAGACAAACTCAAACAGAGgtactctagt ... cttttgacagATGACTTGCGAGATATGTTTTGAGGTGCATCCGTTTGAAAAAATGAGGGCA
tttgcctatttcgtcctcaggactgctacaaatttctgactaatgcttttgacagATGACTTGCGAGATATGTTTTGAGGTGCATCCGTTTGAAAAAATGAGGGCACCTAGATGCGGTCACTATTTCTGTGAGACCTGTTGGACAG
gactaat putative branch site (score: 18)
tgctttt CT-rich tract
tacaaattt TA-rich tract