1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtacgtggacgtcttgcacatcagctttagggcattggagattcctaacagtctgcacgttcctttgttttgtcagtcccctcacctaccaatacgatagctcatggagctgcctgtttgttattttatggacagGTTGGTGGTACAGGCCGGACTACATCATAAACCAGTTGAACATCAACTCTGCCATCACCTCGCCTGCGCATGGGGAGGCGCTTCCAGTGAATTTCTCAAC
species | Physcomitrella patens |
transcript | PP1S79_76V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TAACCGAGTGCTGCCCTCCCACGTTGATGCCGAGACTGCCAAAGCTGAAG GTTGGTGGTACAGGCCGGACTACATCATAAACCAGTTGAACATCAACTCTGEST: gi|18361546|gb|BJ193612.1|BJ193612
genomic: TAACCGAGTGCTGCCCTCCCACGTTGATGCCGAGACTGCCAAAGCTGAAGgtacgtggac ... ttatggacagGTTGGTGGTACAGGCCGGACTACATCATAAACCAGTTGAACATCAACTCTG
EST: TAACCGAGTGCTGCCCTCCCACGTTGATGCCGAGACTGCCAAAGCTGAAG GTTGGTGGTACAGGCCGGACTACATCATAAACCAGTTGAACATCAACTCTG
genomic: TAACCGAGTGCTGCCCTCCCACGTTGATGCCGAGACTGCCAAAGCTGAAGgtacgtggac ... ttatggacagGTTGGTGGTACAGGCCGGACTACATCATAAACCAGTTGAACATCAACTCTG
ctcacctaccaatacgatagctcatggagctgcctgtttgttattttatggacagGTTGGTGGTACAGGCCGGACTACATCATAAACCAGTTGAACATCAACTCTGCCATCACCTCGCCTGCGCATGGGGAGGCGCTTCCAGTGAATTTCTCAAC
ccctcac putative branch site (score: 13)
ttatttt putative PPT
tgtttgttattttat TA-rich tract