1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaattgtcgaaccttcgaggacacaatcttcatgaatttcctccatctagatagcaaatctcatccagcctgtcccgaaaccaattaacaccatatcctaacaccagtgttctatcactgaggacgctgtggctggtgtctgggcccaatgcagGAGGAAGTAAAAGCCTTCTTCGACGTTCACGAGCAAGAAGGCACGCATGCGGGCGGAGTCCATCTCGAAATGACAGGCCAAGACGTGACGGAGTGCGTGG
species | Physcomitrella patens |
transcript | PP1S76_162V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GATGCCATT-TN GAGGAAGTAAAAGCNTTTTTNGACGTTCACGAGCAAGAAGGCACGCATGCGEST: gi|208373047|gb|DC948812.1|DC948812
genomic: GATGCCATTCTGgtaattgtcg ... cccaatgcagGAGGAAGTAAAAGCCTTCTTCGACGTTCACGAGCAAGAAGGCACGCATGCG
EST: AGACGNGA-CCTTNGATGCCA-TNTN GAGGAAGTAAAAGCCTTNTTCGACGTTCACGAGCAAGAAGGCACGCATGCGEST: gi|208357536|gb|DC934058.1|DC934058
genomic: AGACGCGACCCTTCGATGCCATTCTGgtaattgtcg ... cccaatgcagGAGGAAGTAAAAGCCTTCTTCGACGTTCACGAGCAAGAAGGCACGCATGCG
EST: TCAAAGCACCTGGCTCCGGAACGAAGACGCGACCCTTCGATGCCATTCTG GAGGAAGTAAAAGCCTTCTTCGACGTTCACGAGCAAGAAGGCACGCATGCG
genomic: TCAAAGCACCTGGCTCCGGAACGAAGACGCGACCCTTCGATGCCATTCTGgtaattgtcg ... cccaatgcagGAGGAAGTAAAAGCCTTCTTCGACGTTCACGAGCAAGAAGGCACGCATGCG
aacaccagtgttctatcactgaggacgctgtggctggtgtctgggcccaatgcagGAGGAAGTAAAAGCCTTCTTCGACGTTCACGAGCAAGAAGGCACGCATGCGGGCGGAGTCCATCTCGAAATGACAGGCCAAGACGTGACGGAGTGCGTGG
tcctaac putative branch site (score: 5)