1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatttcatccggcatgtggcggttgtaaatactgacttatgtgaagtcttgaaaaaatgatagttgagggtagttctcatgtttatcagaagatgttgtagttgctgatcgttgtttgtgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGGTTGATATTCTCGTTGCTGGTATTGGTACTGGCGGAACTGTAACTGGAG
species | Physcomitrella patens |
transcript | PP1S71_187V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|162171775|gb|FC348951.1|FC348951
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|162219672|gb|FC395876.1|FC395876
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|162184261|gb|FC359683.1|FC359683
genomic: CAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|208381504|gb|DC919506.1|DC919506
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|162202798|gb|FC379780.1|FC379780
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|16137490|gb|BI894354.1|BI894354
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCNGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGEST: gi|208349485|gb|DC905623.1|DC905623
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGANTCCAGCTANCC-GAAG GTGCATTTTGAGEST: gi|18339257|gb|BJ171284.1|BJ171284
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAG
EST: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAG GTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
genomic: CTCCCAATTCGTACATGCTCCAACAATTTGAGAATCCAGCTAACCCGAAGgtatttcatc ... tgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAG
ttctcatgtttatcagaagatgttgtagttgctgatcgttgtttgtgtcatgtagGTGCATTTTGAGACCACCGGGCCAGAGATCTGGGAAGACACGGCTGGTAAGGTTGATATTCTCGTTGCTGGTATTGGTACTGGCGGAACTGTAACTGGAG
tgctgat putative branch site (score: 4)
atgtttat TA-rich tract