1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatctattttctgcacaatgcactcttgcaaccgcataaatcagggccgaaactttcgatctctgaatttctcttaagcgtgctctgtaatggtgatgcgcagtacaagtttgtggtgaaatgtttcaattctaatgtaataatttttgtttcacagTTGACTGGAAAGCGCCCCTTTGTGCTTGCCCGATCTATGTTCCTCGGATCAGGCTCGTACGCTGCCCATTGGACCGGTGACAATGGTGCAACTTGGGGAG
species | Physcomitrella patens |
transcript | PP1S6_50V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ACGTCTATGGAATGAGCGAGGGACTTGCGACATACCGAGCGCTTAAGGAG TTGACTGGAAAGCGCCCCTTTGTGCTTGCCCGATCTATGTTCCTCGGATCA
genomic: ACGTCTATGGAATGAGCGAGGGACTTGCGACATACCGAGCGCTTAAGGAGgtatctattt ... tgtttcacagTTGACTGGAAAGCGCCCCTTTGTGCTTGCCCGATCTATGTTCCTCGGATCA
gtacaagtttgtggtgaaatgtttcaattctaatgtaataatttttgtttcacagTTGACTGGAAAGCGCCCCTTTGTGCTTGCCCGATCTATGTTCCTCGGATCAGGCTCGTACGCTGCCCATTGGACCGGTGACAATGGTGCAACTTGGGGAG
ttctaat putative branch site (score: 4)
tttttgtttc putative PPT
aaatgtttcaattcta TA-rich tract