1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtctgggataatgcgcctccctcgtttatcttgcgtactgagtttgcagttttttctggttctcattttcggtgtgtggttttcatagttttactggtgcattttatgattggttatagcattttctgaggcttttacgtgcctgttgatgaagcttttgaccttattgtaaattctttcgtgtgctcagGCAGCCTTCATTTTTGACGCACTCGGCAGAGTATGCACTCGTGCCCGAACGATTTTGCCGTGTAAATAGGGATTGACAGATCTTACCTTAAGAATTGAGC
species | Physcomitrella patens |
transcript | PP1S6_315V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCTTGGTGCTTCTTTGGTGGACGTGAATTCTTTCTGACGGAGGTCAACAG GCAGCCTTCATTTTTGACGCACTCGGCAGAGTATGCACTCGTGCCCGAACGEST: gi|162263255|gb|FC439063.1|FC439063
genomic: TCTTGGTGCTTCTTTGGTGGACGTGAATTCTTTCTGACGGAGGTCAACAGgtctgggata ... gtgtgctcagGCAGCCTTCATTTTTGACGCACTCGGCAGAGTATGCACTCGTGCCCGAACG
EST: TCTTGGTGCTTCTTTGGTGGACGTGAATTCTTTCTGACGGAGGTCAACAG GCAGCCTTCATTTTTGACGCACTCGGCAGAGTATGCACTCGTGCCCGAACG
genomic: TCTTGGTGCTTCTTTGGTGGACGTGAATTCTTTCTGACGGAGGTCAACAGgtctgggata ... gtgtgctcagGCAGCCTTCATTTTTGACGCACTCGGCAGAGTATGCACTCGTGCCCGAACG
tacgtgcctgttgatgaagcttttgaccttattgtaaattctttcgtgtgctcagGCAGCCTTCATTTTTGACGCACTCGGCAGAGTATGCACTCGTGCCCGAACGATTTTGCCGTGTAAATAGGGATTGACAGATCTTACCTTAAGAATTGAGC
ttttgac putative branch site (score: 18)
ttctttcgt putative PPT
ttattgtaaattcttt TA-rich tract