1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaaaaagctcctcttgaacccctaagatttatttccaatgacgatgcatgatatgcgacctctacaggtcacaaagcactaagatcgatggtgtttgacaatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCCTTTCCTTTATCCCGACATTGTGTGGGACTTCCGACTCCCACTTGTGAAG
species | Physcomitrella patens |
transcript | PP1S68_116V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGG GTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCCEST: gi|100370735|gb|BY948490.1|BY948490
genomic: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGGgtaaaaagct ... aatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCC
EST: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGG GTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCCEST: gi|100371483|gb|BY968001.1|BY968001
genomic: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGGgtaaaaagct ... aatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCC
EST: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAA-GG GTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCCEST: gi|162151020|gb|FC326837.1|FC326837
genomic: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGGgtaaaaagct ... aatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCC
EST: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGG GTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCCEST: gi|162190662|gb|FC367548.1|FC367548
genomic: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGGgtaaaaagct ... aatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCC
EST: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGG GTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCC
genomic: GACGTGCAGCTGCTGAATGATCTGCTGGAGGAGAAGAACCGGGAGAAAGGgtaaaaagct ... aatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCC
gcgacctctacaggtcacaaagcactaagatcgatggtgtttgacaatggaacagGTTGCACGTTCCTATTCACGTCGATGCCGCAAGTGGAGGCTTCATAGCTCCTTTCCTTTATCCCGACATTGTGTGGGACTTCCGACTCCCACTTGTGAAG
gtttgac putative branch site (score: 28)