1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttagcttccgttctcagtagcattcaacttggtgcaatctgtgtatcccgtgtatcattttttgctgtgcaggacatgatggtcttcagttttacaaatgattatgaactacatctgacttctgccattctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTGTCCTCGACGTAGGTTCTGGCTCTGGTTATCTCACTGCTGTCTTCGGCC
species | Physcomitrella patens |
transcript | PP1S55_159V6.3 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
ttcagttttacaaatgattatgaactacatctgacttctgccattctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTGTCCTCGACGTAGGTTCTGGCTCTGGTTATCTCACTGCTGTCTTCGGCC
atctgac putative branch site (score: 13)
ttctgtct putative PPT
ttttacaaatgattat TA-rich tract