1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtattagctagacttttatcttattttgtgaatgatagtttcctgttgatactcattatatgaacataggagccgccaccaattaaacaagtgtttgcatttatttatttgacgaagcacttgttttactctggtccagTTCTAGCACCGCCCACTGAGACCAAAAAAGAAGGTCCTCGGAAGGATGATGAAAGCGCAATTGACGTGAAACCACCCGTCAAGCATGTCCTTTCTAAAGA
species | Physcomitrella patens |
transcript | PP1S54_134V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGCGGTCGAGGGAGTCCAGCCAGCTATACCAGAGAATGCACCTATTGAAG TTCTAGCACCGCCCACTGAGA
genomic: TGCGGTCGAGGGAGTCCAGCCAGCTATACCAGAGAATGCACCTATTGAAGgtattagcta ... tctggtccagTTCTAGCACCGCCCACTGAGA
aaacaagtgtttgcatttatttatttgacgaagcacttgttttactctggtccagTTCTAGCACCGCCCACTGAGACCAAAAAAGAAGGTCCTCGGAAGGATGATGAAAGCGCAATTGACGTGAAACCACCCGTCAAGCATGTCCTTTCTAAAGA
atttgac putative branch site (score: 7)
ttttactct putative PPT
tttgcatttatttatt TA-rich tract