1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgagcatatctgtcattcgatgtcttatgtgctggatatgtgactcttgatgtgtttccgtcctattcatgtacgcaagagtttccttctgaactgctaactgtttttacagCTGACGTTTTCGTCACCAAGAGAATCAAGTTTACTCAACAGGATTTGGCGCAGAAGGATCTAGAAATGCTTGACCAATACGTTGCCAAGCAGCGGTCAGA
species | Physcomitrella patens |
transcript | PP1S49_156V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CATGGCGAGCAGGGTGCTGAAGAGGCCGTTAAATGTCGAGGTTGAAAACG CTGACGTTTTCGTCACCAAGAGAATCAAGTTTACTCAACAGGATTTGGCGC
genomic: CATGGCGAGCAGGGTGCTGAAGAGGCCGTTAAATGTCGAGGTTGAAAACGgtgagcatat ... gtttttacagCTGACGTTTTCGTCACCAAGAGAATCAAGTTTACTCAACAGGATTTGGCGC
ccgtcctattcatgtacgcaagagtttccttctgaactgctaactgtttttacagCTGACGTTTTCGTCACCAAGAGAATCAAGTTTACTCAACAGGATTTGGCGCAGAAGGATCTAGAAATGCTTGACCAATACGTTGCCAAGCAGCGGTCAGA
tgctaac putative branch site (score: 4)
ctgttttt CT-rich tract
tgttttta TA-rich tract