1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacacatccacacgaggtcagtttctcacacttgatggctgcaaacattccataggaggtgatcactgatacctttcagattcttcaagatccgacacagagagaactgacactattcccctatgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATGGAATCGCACTCAGTCTAGTGCGTCTCTACGGGCTCGGCGTCCGGAATA
species | Physcomitrella patens |
transcript | PP1S485_2V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATAGAACAATAACCACCATAGTGGATEST: gi|100400045|gb|BY990751.1|BY990751
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|208350029|gb|DC910264.1|DC910264
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|208383770|gb|DC911480.1|DC911480
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACA-GAAGCTCCATACAACAATAEST: gi|162270839|gb|FC446868.1|FC446868
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGA-GCTCCATACAACAATA
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|208385996|gb|DC956512.1|DC956512
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: CGTGCGCANCAGACGGGGAGCCTTTCAG GAGCATGACCAAGANCAAGAGCTNCCATACANCAATAACCACCATAGTGGAEST: gi|100421006|gb|BY993569.1|BY993569
genomic: CGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCT-CCATACAACAATAACCACCATAGTGGA
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|162208832|gb|FC384968.1|FC384968
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATAGAACAATAACCACCATAGTGGATEST: gi|208388919|gb|DC932947.1|DC932947
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTC-ATACAACA-TA-CCACCATAGTGGAEST: gi|100401340|gb|BY990953.1|BY990953
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGA
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAANCA-GAGCTCCATACNNACA-TAACCACCATAGTGGEST: gi|100410297|gb|BY992036.1|BY992036
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAA-CAAGAGCTCCATACA-ACAATAACCACCATAGTGG
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACNAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|162259231|gb|FC436161.1|FC436161
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|208377449|gb|DC906676.1|DC906676
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATEST: gi|100419722|gb|BY957690.1|BY957690
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGAT
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAGGAGCTCCCATACA-CAATAACCEST: gi|100415879|gb|BY956969.1|BY956969
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCC-ATACAACAATAACC
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAAACA-GAGCTCCATACAACAATAACCACCATAGTGEST: gi|208383925|gb|DC907316.1|DC907316
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAA-CAAGAGCTCCATACAACAATAACCACCATAGTG
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAACAAGAGCTCCATACA-CAATAEST: gi|100357038|gb|BY983663.1|BY983663
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATA
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAAEST: gi|100379676|gb|BY949888.1|BY949888
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAA
EST: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAG GAGCATGACAAAGAAACA-GAGCTCCCATACAACA-TAACCACCATAGTGG
genomic: ACATTGGTGTCAACGACTATCACGTGCGCAACAGACGGGGAGCCTTTCAGgtacacatcc ... atgaccaaagGAGCATGACAAAGAA-CAAGAGCTCC-ATACAACAATAACCACCATAGTGG
agattcttcaagatccgacacagagagaactgacactattcccctatgaccaaagGAGCATGACAAAGAACAAGAGCTCCATACAACAATAACCACCATAGTGGATGGAATCGCACTCAGTCTAGTGCGTCTCTACGGGCTCGGCGTCCGGAATA
aactgac putative branch site (score: 2)
ttcccctat putative PPT