1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ctctagagaccccttttcatacttttcaaacagtgatcgtatcgcgcgacatcttacttagatagctatgctattttgcatgttttaatttgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCAAACAAACAAGATATG
species | Physcomitrella patens |
transcript | PP1S47_298V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAG CAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCAEST: gi|162208431|gb|FC384186.1|FC384186
genomic: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtg ... tgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
EST: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAG CAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCAEST: gi|67575986|gb|BJ948810.1|BJ948810
genomic: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtg ... tgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
EST: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAG CAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
genomic: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtg ... tgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
gcgacatcttacttagatagctatgctattttgcatgttttaatttgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCAAACAAACAAGATATG
ttttaat putative branch site (score: 9)
atgttttaatttgt TA-rich tract