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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgttgcttcttcacgaggtaaagcacaccttagaaaacctgtaatatagtggaaaaacgtcaggataagaagataaagattattatattatattatactatattatttatttttctattcaaattcatgtaaaatcctttcactctcctccacgttgaaaactcaagaaaacaaatttgggtcacttgctcagATGCCAGCACCTGCGCCGGCGCCAACCATGCAACCAGCTCAGCAGTACATGCAACAGCAGCAACAACTCCGGATGATGAGCCAACAGAACAGTATGATCC

Basic information

species Physcomitrella patens
transcript PP1S47_284V6.5
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttcactctcctccacgttgaaaactcaagaaaacaaatttgggtcacttgctcagATGCCAGCACCTGCGCCGGCGCCAACCATGCAACCAGCTCAGCAGTACATGCAACAGCAGCAACAACTCCGGATGATGAGCCAACAGAACAGTATGATCC
                                              cttgctc  CT-rich tract
                          aagaaaacaaattt  TA-rich tract