1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtcttaggtgcttcacttgcattcggaatttttcgtgcgttcgctcaaaatgaacagcatttaactgtcagtggagttcactgtaccatcatattgaaaacttgctggaattggacagGGTTATGGAATTAGACTTGGCTTCTTTTGCGTCGATCCGACAGTTTGCAGCAGGGTATTTGCACCTTGGTCTCCCATTAAACTCCCTT
species | Physcomitrella patens |
transcript | PP1S475_14V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AAGCAAGCTGTGGCAGATATTATTCGAGAATCTAGTAACCCCTCTGTCAG GGTTATGGAATTAGACTTGGCTTCTTTTGCGTCGATCCGACAGTTTGCAGCEST: gi|67577893|gb|BJ950060.1|BJ950060
genomic: AAGCAAGCTGTGGCAGATATTATTCGAGAATCTAGTAACCCCTCTGTCAGgtcttaggtg ... aattggacagGGTTATGGAATTAGACTTGGCTTCTTTTGCGTCGATCCGACAGTTTGCAGC
EST: AAGCAAGCTGTGGCAGATATTATTCGAGAATCTAGTAACCCCTCTGTCAG GGTTATGGAATTAGACTTGGCTTCTTTTGCGTCGATCCGACAGTTTGCAGC
genomic: AAGCAAGCTGTGGCAGATATTATTCGAGAATCTAGTAACCCCTCTGTCAGgtcttaggtg ... aattggacagGGTTATGGAATTAGACTTGGCTTCTTTTGCGTCGATCCGACAGTTTGCAGC
actgtcagtggagttcactgtaccatcatattgaaaacttgctggaattggacagGGTTATGGAATTAGACTTGGCTTCTTTTGCGTCGATCCGACAGTTTGCAGCAGGGTATTTGCACCTTGGTCTCCCATTAAACTCCCTT
atttaac putative branch site (score: 6)
atattgaaaa TA-rich tract