1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAATTGCCAAATATTGCGGCGAAGAATGAATCTATTACTGGAGGTCCAGAT
species | Physcomitrella patens |
transcript | PP1S450_9V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37849254|gb|BJ607262.1|BJ607262
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67720325|gb|BJ970584.1|BJ970584
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162209966|gb|FC385796.1|FC385796
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37831964|gb|BJ589976.1|BJ589976
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67716746|gb|BJ967006.1|BJ967006
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67712576|gb|BJ966025.1|BJ966025
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162213390|gb|FC389067.1|FC389067
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162270208|gb|FC446284.1|FC446284
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|18349465|gb|BJ181514.1|BJ181514
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67716643|gb|BJ966903.1|BJ966903
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67569245|gb|BJ942069.1|BJ942069
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162274827|gb|FC451062.1|FC451062
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162271310|gb|FC446181.1|FC446181
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67725267|gb|BJ975526.1|BJ975526
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67570999|gb|BJ943823.1|BJ943823
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67575355|gb|BJ948179.1|BJ948179
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162209967|gb|FC385797.1|FC385797
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162241306|gb|FC416937.1|FC416937
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67578392|gb|BJ950559.1|BJ950559
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|208383593|gb|DC903550.1|DC903550
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|18343862|gb|BJ175900.1|BJ175900
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCEST: gi|67725655|gb|BJ975914.1|BJ975914
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCC
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67701284|gb|BJ961517.1|BJ961517
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37848314|gb|BJ606322.1|BJ606322
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67697255|gb|BJ957488.1|BJ957488
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37846534|gb|BJ604542.1|BJ604542
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67694304|gb|BJ954537.1|BJ954537
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67573584|gb|BJ946408.1|BJ946408
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162215279|gb|FC391047.1|FC391047
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67723967|gb|BJ974226.1|BJ974226
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|18342708|gb|BJ174743.1|BJ174743
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37827706|gb|BJ585718.1|BJ585718
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162274939|gb|FC450590.1|FC450590
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162247232|gb|FC423056.1|FC423056
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37850471|gb|BJ608479.1|BJ608479
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|18338963|gb|BJ170989.1|BJ170989
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162227897|gb|FC403705.1|FC403705
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67721592|gb|BJ971851.1|BJ971851
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67717133|gb|BJ967392.1|BJ967392
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67692501|gb|BJ952734.1|BJ952734
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67696970|gb|BJ957203.1|BJ957203
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37827711|gb|BJ585723.1|BJ585723
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162221852|gb|FC398419.1|FC398419
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67696722|gb|BJ956955.1|BJ956955
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37834640|gb|BJ592652.1|BJ592652
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37848979|gb|BJ606987.1|BJ606987
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162261084|gb|FC436945.1|FC436945
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162204520|gb|FC380812.1|FC380812
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162220281|gb|FC396312.1|FC396312
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37836124|gb|BJ594132.1|BJ594132
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162213391|gb|FC389068.1|FC389068
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67726252|gb|BJ976511.1|BJ976511
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37842061|gb|BJ600069.1|BJ600069
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67573337|gb|BJ946161.1|BJ946161
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37821854|gb|BJ579920.1|BJ579920
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|18348414|gb|BJ180462.1|BJ180462
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162258722|gb|FC434521.1|FC434521
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|7648112|gb|AW739095.1|AW739095
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|7583808|gb|AW699712.1|AW699712
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: GCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37850481|gb|BJ608489.1|BJ608489
genomic: GCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162274826|gb|FC451061.1|FC451061
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37828417|gb|BJ586429.1|BJ586429
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67718904|gb|BJ969163.1|BJ969163
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|15728272|gb|BI740704.1|BI740704
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162227898|gb|FC403706.1|FC403706
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67709889|gb|BJ965705.1|BJ965705
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67727254|gb|BJ977513.1|BJ977513
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67573867|gb|BJ946691.1|BJ946691
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67717745|gb|BJ968004.1|BJ968004
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162220280|gb|FC396311.1|FC396311
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|15327418|gb|BI488097.1|BI488097
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67724286|gb|BJ974545.1|BJ974545
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162246684|gb|FC425277.1|FC425277
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37851888|gb|BJ609896.1|BJ609896
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|162269282|gb|FC444786.1|FC444786
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37852783|gb|BJ610791.1|BJ610791
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|67725163|gb|BJ975422.1|BJ975422
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAEST: gi|37823053|gb|BJ581119.1|BJ581119
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
tttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAATTGCCAAATATTGCGGCGAAGAATGAATCTATTACTGGAGGTCCAGAT
gtctcac putative branch site (score: 174)
tttgctt putative PPT
tatgttta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAATTGCCAAATATTGCGGCGAAGAATGAATCTATTACTGGAGGTCCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG