1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtacttgtttctttgattggcatttatagtgttattttgatatagtcacgtctctgtgcatattttgtgtgtcttcttttcagtctaatgttgtagtttagttcaacttgggtatcaaaacacgtctaacagccgtcatttttacggatgcagACTAAGGCCGCTGGAGATGCTAAAAAGAAGAAATGAGCTGTAGGCTGAGATTTCCTTCAGACTTTGTTGCGACGAGGGACTTTTCTCCTGTATTAACGGC
species | Physcomitrella patens |
transcript | PP1S450_3V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGATCAAGGAGCGCAAGAACCGTTCGAAGAAGATCAGGGGTGTAAAGAAG ACTAAGGCCGCTGGAGATGCTAAAAAGAAGAAATGAGCTGTAGGCTGAGAT
genomic: AGATCAAGGAGCGCAAGAACCGTTCGAAGAAGATCAGGGGTGTAAAGAAGgtacttgttt ... acggatgcagACTAAGGCCGCTGGAGATGCTAAAAAGAAGAAATGAGCTGTAGGCTGAGAT
tagttcaacttgggtatcaaaacacgtctaacagccgtcatttttacggatgcagACTAAGGCCGCTGGAGATGCTAAAAAGAAGAAATGAGCTGTAGGCTGAGATTTCCTTCAGACTTTGTTGCGACGAGGGACTTTTCTCCTGTATTAACGGC
gtctaac putative branch site (score: 13)
tttttac putative PPT
tcattttta TA-rich tract