1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...ttgttcgttttgtattttagtgttttcgtttcttccttccactttaatgataccaggttgttaacgaaatgatgcccgttcctttcctgcatgaactcagATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATTAAGCCCGACAATTTCCTGATGGGACTTGGCAGGCGAGCAAATCAG
species | Physcomitrella patens |
transcript | PP1S430_12V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTG ATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATTEST: gi|162199548|gb|FC373200.1|FC373200
genomic: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTGgtatgaaaat ... atgaactcagATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATT
EST: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTG ATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATTEST: gi|162240779|gb|FC416345.1|FC416345
genomic: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTGgtatgaaaat ... atgaactcagATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATT
EST: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTG ATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATTEST: gi|162257199|gb|FC433075.1|FC433075
genomic: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTGgtatgaaaat ... atgaactcagATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATT
EST: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTG ATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATT
genomic: GCAGTCGGAAGTTTTCCTTGAAGACGGTCCTCATGCTCGCAGATCAACTGgtatgaaaat ... atgaactcagATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATT
aatgataccaggttgttaacgaaatgatgcccgttcctttcctgcatgaactcagATCAACAGAGTAGAGTACGTTCATGCGAAGAGTTTTCTTCACAGAGACATTAAGCCCGACAATTTCCTGATGGGACTTGGCAGGCGAGCAAATCAG
tgttaac putative branch site (score: 5)
ttcctttcctgcat putative PPT
ttgttaa TA-rich tract