1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tgtattgttgtagtaactcggttactcacattttcgaagctaaggttgagcaattctttcgtcgttgatattagcgttaaccaattctgtggtgtttcagGAGGACGCAAAGAGACAAGACAAGAGTGCGAAGAACAGATATACCGTCTAGAAAATAGTGTGTGTTAGCATAAATGACATGTGTTAGGACTGCCAGTTTT
species | Physcomitrella patens |
transcript | PP1S426_46V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AATGGAAGGAGGTTCTTGACTATAATGACAAGCTCGGCTACCTTGTCCAT GAGGACGCAAAGAGACAAGACAAGAGTGCGAAGAACAGATATACCGTCTAG
genomic: AATGGAAGGAGGTTCTTGACTATAATGACAAGCTCGGCTACCTTGTCCATgtaagttatt ... ggtgtttcagGAGGACGCAAAGAGACAAGACAAGAGTGCGAAGAACAGATATACCGTCTAG
ttgagcaattctttcgtcgttgatattagcgttaaccaattctgtggtgtttcagGAGGACGCAAAGAGACAAGACAAGAGTGCGAAGAACAGATATACCGTCTAGAAAATAGTGTGTGTTAGCATAAATGACATGTGTTAGGACTGCCAGTTTT
cgttaac putative branch site (score: 8)
ttgatatta TA-rich tract