1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtactgtctcagatagcttcttagttgaaacatgtgctctgctggtttataataaattgtcattctttgttgacattgagttgggatccactactgtaccctgagacatgtgaatcgtctgagataacttgtccagGTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCGGGCTTGCAAGGTCTTTCTCCAACGATCAGAATGGTCAACCATTAACTAA
species | Physcomitrella patens |
transcript | PP1S3_535V6.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGGTCTACATTACTGCCATGTGAACCAAGTGCTTCACAGGGATATCAAAG GTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCGEST: gi|162257660|gb|FC433587.1|FC433587
genomic: AGGTCTACATTACTGCCATGTGAACCAAGTGCTTCACAGGGATATCAAAGgtactgtctc ... acttgtccagGTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCG
EST: AGGTCTACATTACTGCCATGTGAACCAAGTGCTTCACAGGGATATCAAAG GTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCGEST: gi|162156181|gb|FC332556.1|FC332556
genomic: AGGTCTACATTACTGCCATGTGAACCAAGTGCTTCACAGGGATATCAAAGgtactgtctc ... acttgtccagGTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCG
EST: AGGTCTACATTACTGCCATGTGAACCAAGTGCTTCACAGGGATATCAAAG GTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCG
genomic: AGGTCTACATTACTGCCATGTGAACCAAGTGCTTCACAGGGATATCAAAGgtactgtctc ... acttgtccagGTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCG
tgggatccactactgtaccctgagacatgtgaatcgtctgagataacttgtccagGTTCAAATCTTCTTATCGACAACAATGGCATTTTGAAGCTTGCCGACTTCGGGCTTGCAAGGTCTTTCTCCAACGATCAGAATGGTCAACCATTAACTAA
agataac putative branch site (score: 2)
cttgtcc CT-rich tract
ataactt TA-rich tract