1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...ggagcatcgcaagtggtttgcacatgctccaattgtcatgcgtaatgaacttgattctgaagcgcgtgtgagctctgaatctgcctgtgatgtatgacagGTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCAACATCTCAAAATGTCCTAATATTTGAGCACAAAAG
species | Physcomitrella patens |
transcript | PP1S395_48V6.3 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GTAGTGTTGATCCGTCATTGTGGGTCACCAACTCAGCGCCTGCCATTCTG GTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCAEST: gi|162260622|gb|FC436626.1|FC436626
genomic: GTAGTGTTGATCCGTCATTGTGGGTCACCAACTCAGCGCCTGCCATTCTGgtcagtggag ... tgtatgacagGTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCA
EST: GTAGTGTTGATCCGTCATTGTGGGTCACCCACTCAGCGCCTGCCATTCTG GTAAGGGACCAGGCTATCCTCCTCA-TTTGGGTTCGCTGAGGGCAATAGCAEST: gi|67571712|gb|BJ944536.1|BJ944536
genomic: GTAGTGTTGATCCGTCATTGTGGGTCACCAACTCAGCGCCTGCCATTCTGgtcagtggag ... tgtatgacagGTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCA
EST: AACTCAGCGCCTGCCATTCTG GTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCA
genomic: AACTCAGCGCCTGCCATTCTGgtcagtggag ... tgtatgacagGTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCA
tgaacttgattctgaagcgcgtgtgagctctgaatctgcctgtgatgtatgacagGTAAGGGACCAGGCTATCCTCCTCAATTTGGGTTCGCTGAGGGCAATAGCAACATCTCAAAATGTCCTAATATTTGAGCACAAAAG
acttgat putative branch site (score: 15)