1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtacattctcaacctatcaacgcaatatgaaatcgtctccttttccttctgtcttcacaataccttttatagtggtcacctggctaggagatcttgacgtcaactgttctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTTGGATCAGGAGTATGTTGGGAACGAGACG
species | Physcomitrella patens |
transcript | PP1S38_329V6.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208374993|gb|DC956403.1|DC956403
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGCCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67716844|gb|BJ967103.1|BJ967103
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208346882|gb|DC905426.1|DC905426
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208391477|gb|DC937625.1|DC937625
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|18347318|gb|BJ179364.1|BJ179364
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208389761|gb|DC938323.1|DC938323
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|18329908|gb|BJ161914.1|BJ161914
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|19789832|gb|BQ041538.1|BQ041538
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208380043|gb|DC914593.1|DC914593
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162232208|gb|FC408057.1|FC408057
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162239200|gb|FC416482.1|FC416482
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162266658|gb|FC442837.1|FC442837
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208364389|gb|DC950690.1|DC950690
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|19779720|gb|BQ039469.1|BQ039469
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162208344|gb|FC384656.1|FC384656
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67573430|gb|BJ946254.1|BJ946254
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|18351731|gb|BJ183783.1|BJ183783
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|100430202|gb|BY959750.1|BY959750
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|19788553|gb|BQ040790.1|BQ040790
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCTTCTACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208345094|gb|DC909456.1|DC909456
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208386339|gb|DC932835.1|DC932835
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGCCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|19781204|gb|BQ039665.1|BQ039665
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|22491783|gb|BU051706.1|BU051706
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: ATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67717988|gb|BJ968247.1|BJ968247
genomic: ATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208389889|gb|DC937720.1|DC937720
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162273383|gb|FC449832.1|FC449832
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208355830|gb|DC930193.1|DC930193
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208366885|gb|DC951372.1|DC951372
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208397433|gb|DC916359.1|DC916359
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: AGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|18355260|gb|BJ187319.1|BJ187319
genomic: AGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162208026|gb|FC384221.1|FC384221
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208349865|gb|DC905989.1|DC905989
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67709595|gb|BJ965411.1|BJ965411
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|19788241|gb|BQ040741.1|BQ040741
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67726492|gb|BJ976751.1|BJ976751
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67696812|gb|BJ957045.1|BJ957045
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGATAT-GNTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|18373232|gb|BJ204834.1|BJ204834
genomic: CGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162233764|gb|FC410030.1|FC410030
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67725048|gb|BJ975307.1|BJ975307
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: GAGCTCCCTCGATATGG-TTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|100449524|gb|CJ973802.1|CJ973802
genomic: GAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|15728298|gb|BI740717.1|BI740717
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208382921|gb|DC928346.1|DC928346
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162275294|gb|FC451478.1|FC451478
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|18354041|gb|BJ186096.1|BJ186096
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGEST: gi|67704701|gb|BJ964934.1|BJ964934
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTG
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208389794|gb|DC937429.1|DC937429
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|162217825|gb|FC393613.1|FC393613
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|208365341|gb|DC950784.1|DC950784
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|67716531|gb|BJ966791.1|BJ966791
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTEST: gi|100372326|gb|BY985544.1|BY985544
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
EST: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTG CATATTGCATTGGTCTACTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
genomic: CGAGCTCCCTCGATATGGTTTGAAGGGCGGTCTCACCAACTATGCTGCTGgtacattctc ... ctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGT
cttttatagtggtcacctggctaggagatcttgacgtcaactgttctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTTGGATCAGGAGTATGTTGGGAACGAGACG
tcttgac putative branch site (score: 3)
ctgttct putative PPT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacattctcaacctatcaacgcaatatgaaatcgtctccttttccttctgtcttcacaataccttttatagtggtcacctggctaggagatcttgacgtcaactgttctgtatgcagCATATTGCACTGGTCTTCTTTTGGCTCGTCGGCATTTGAAGAACTTCGAGTTGGATCAGGAGTATGTTGGGAACGAGACG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC