1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...catcacaagtcctcttgatactgcgagatcagtatcatttatgagatcactgtccaactccagtgcactaattttttttggttcgcttatgtttttacagGTGCTTTTGAGTATGCTTGCAGCGTACCATTCCCATGTGAAAACTTATGAAAACACCCTCATCACTAAAATTTTTGGCCTCCATCGTATCAAGCCCTACG
species | Physcomitrella patens |
transcript | PP1S31_309V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CATCAAAACGATGAAGAAGGCAGAAGTGAAG GTGCTTTTGAGTATGCTTGCAGCGTACCATTCCCATGTGAAAACTTATGAA
genomic: CATCAAAACGATGAAGAAGGCAGAAGTGAAGgtgatctacc ... gtttttacagGTGCTTTTGAGTATGCTTGCAGCGTACCATTCCCATGTGAAAACTTATGAA
atcactgtccaactccagtgcactaattttttttggttcgcttatgtttttacagGTGCTTTTGAGTATGCTTGCAGCGTACCATTCCCATGTGAAAACTTATGAAAACACCCTCATCACTAAAATTTTTGGCCTCCATCGTATCAAGCCCTACG
cactaat putative branch site (score: 6)
tgttttt putative PPT
taattttttttggtt TA-rich tract