1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaaggttgggagtggctctcttcattcaactggtagctatgctgctaagttctcacaaatggctgaaatgttctgaattctatggagttgagtgcacccatgtaacagacgacatgcgagatttattgtgcggatttttctgtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATGCCGCAATCTATTTGAGTCAG
species | Physcomitrella patens |
transcript | PP1S295_28V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAG GCTCGGAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATEST: gi|67716278|gb|BJ966538.1|BJ966538
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAG GCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATEST: gi|208372289|gb|DC936447.1|DC936447
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAG GCTCGAAGCCTACCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATEST: gi|100356111|gb|BY946202.1|BY946202
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAG GCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATEST: gi|67508414|gb|BJ941281.1|BJ941281
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAG GCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATEST: gi|208355715|gb|DC910613.1|DC910613
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAN GCTCGAAGCCTCCCAACCGACAGACTTCGACCNATGTTTCTCATCATAAATEST: gi|208374316|gb|DC940673.1|DC940673
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
EST: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAG GCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
genomic: TCACAACATATACTCTTCTGGTGCTTTTCTGGGCTGAAATCTATCACCAGgtaaggttgg ... gtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAAT
cccatgtaacagacgacatgcgagatttattgtgcggatttttctgtgatttcagGCTCGAAGCCTCCCAACCGACAGACTTCGACCGATGTTTCTCATCATAAATGCCGCAATCTATTTGAGTCAG
atgtaac putative branch site (score: 1)
tttttctgt putative PPT
agatttatt TA-rich tract