1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaaccactccaaagtgcactcgcctacctgtcagcttttcttataatgcatggtatttttaaagtagaattctgagacttctctaatcttgaaattaatctgactggtgattgtacagGCAAGTCTCAGTTGAAGAAGGTGAAACCAAAGCCCGGGAGCTTAGCGCACTCATGATTGAGACCAGTGCTAAAGCGGGATTTAATATCAAG
species | Physcomitrella patens |
transcript | PP1S288_43V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATGTGGTTTTAGTGCTTGTTGGCAACCAAGACCGATCTCGTGGATAAGAG GCAAGTCTCAGTTGAAGAAGGTGAAACCAAAGCCCGGGAGCTTAGCGCACTEST: gi|37850119|gb|BJ608127.1|BJ608127
genomic: ATGTGGTTTTAGTGCTTGTTGGCAA-CAAGACCGATCTCGTGGATAAGAGgtaaccactc ... gattgtacagGCAAGTCTCAGTTGAAGAAGGTGAAACCAAAGCCCGGGAGCTTAGCGCACT
EST: GATGTGGTTTTAGTGCTTGTTGGCAACAAGACCGATCTCGTGGATAAGAG GCAAGTCTCAGTTGAAGAAGGTGAAACCAAAGCCCGGGAGCTTAGCGCACT
genomic: GATGTGGTTTTAGTGCTTGTTGGCAACAAGACCGATCTCGTGGATAAGAGgtaaccactc ... gattgtacagGCAAGTCTCAGTTGAAGAAGGTGAAACCAAAGCCCGGGAGCTTAGCGCACT
gtagaattctgagacttctctaatcttgaaattaatctgactggtgattgtacagGCAAGTCTCAGTTGAAGAAGGTGAAACCAAAGCCCGGGAGCTTAGCGCACTCATGATTGAGACCAGTGCTAAAGCGGGATTTAATATCAAG
atctgac putative branch site (score: 7)
taatcttgaaattaat TA-rich tract